Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ctdp1Q7TSG2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.58■□□□□ 0.41
Ctdp1Q7TSG2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Gm43799-201ENSMUST00000201845 579 ntBASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ctdp1Q7TSG2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 App-207ENSMUST00000227737 2827 ntBASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ctdp1Q7TSG2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctdp1Q7TSG2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Gm13559-201ENSMUST00000120476 863 ntBASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ctdp1Q7TSG2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms