Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.53□□□□□ -0.24
Rif1Q6PR54 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.53□□□□□ -0.24
Rif1Q6PR54 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.53□□□□□ -0.24
Rif1Q6PR54 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rif1Q6PR54 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.52□□□□□ -0.24
Rif1Q6PR54 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.52□□□□□ -0.24
Rif1Q6PR54 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.52□□□□□ -0.24
Rif1Q6PR54 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Rif1Q6PR54 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Gm45384-201ENSMUST00000210451 277 ntBASIC13.52□□□□□ -0.25
Rif1Q6PR54 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rif1Q6PR54 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.51□□□□□ -0.25
Rif1Q6PR54 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.51□□□□□ -0.25
Rif1Q6PR54 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rif1Q6PR54 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms