Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim45Q6PFY8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim45Q6PFY8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim45Q6PFY8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim45Q6PFY8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim45Q6PFY8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Gm27357-201ENSMUST00000183754 135 ntBASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim45Q6PFY8 Phf7-203ENSMUST00000226565 1971 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms