Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc2Q6PDG5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcc2Q6PDG5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.76■□□□□ 0.59
Smarcc2Q6PDG5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Gm15794-201ENSMUST00000120182 631 ntBASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc2Q6PDG5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Olfr129-201ENSMUST00000122318 993 ntBASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Mir3081-201ENSMUST00000175305 84 ntBASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc2Q6PDG5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc2Q6PDG5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms