Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Sybu-209ENSMUST00000228639 4113 ntBASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Gm44450-201ENSMUST00000199528 114 ntBASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Gm7370-201ENSMUST00000219471 767 ntBASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Smarcd3Q6P9Z1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcd3Q6P9Z1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd3Q6P9Z1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Smarcd3Q6P9Z1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms