Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg2Q6NS82 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm7153-201ENSMUST00000117092 455 ntBASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm13186-201ENSMUST00000118031 316 ntBASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm27357-201ENSMUST00000183754 135 ntBASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg2Q6NS82 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Gm24589-201ENSMUST00000116692 94 ntBASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Gm15794-201ENSMUST00000120182 631 ntBASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg2Q6NS82 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.28■□□□□ 0.36
Retreg2Q6NS82 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retreg2Q6NS82 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms