Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scube3Q66PY1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.87■□□□□ 0.29
Scube3Q66PY1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Gm34391-201ENSMUST00000203706 907 ntBASIC16.86■□□□□ 0.29
Scube3Q66PY1 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.86■□□□□ 0.29
Scube3Q66PY1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scube3Q66PY1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.85■□□□□ 0.29
Scube3Q66PY1 Birc2-201ENSMUST00000054878 378 ntBASIC16.85■□□□□ 0.29
Scube3Q66PY1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scube3Q66PY1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.84■□□□□ 0.29
Scube3Q66PY1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scube3Q66PY1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Scube3Q66PY1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.83■□□□□ 0.29
Scube3Q66PY1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scube3Q66PY1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scube3Q66PY1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gm24589-201ENSMUST00000116692 94 ntBASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gm12644-201ENSMUST00000119935 606 ntBASIC16.83■□□□□ 0.28
Scube3Q66PY1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.83■□□□□ 0.28
Scube3Q66PY1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scube3Q66PY1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms