Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col11a2Q64739 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col11a2Q64739 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.37■□□□□ 0.69
Col11a2Q64739 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.37■□□□□ 0.69
Col11a2Q64739 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.37■□□□□ 0.69
Col11a2Q64739 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.37■□□□□ 0.69
Col11a2Q64739 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.37■□□□□ 0.69
Col11a2Q64739 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.37■□□□□ 0.69
Col11a2Q64739 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col11a2Q64739 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.37■□□□□ 0.69
Col11a2Q64739 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.37■□□□□ 0.69
Col11a2Q64739 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.36■□□□□ 0.69
Col11a2Q64739 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.36■□□□□ 0.69
Col11a2Q64739 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.36■□□□□ 0.69
Col11a2Q64739 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col11a2Q64739 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Col11a2Q64739 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col11a2Q64739 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm25287-201ENSMUST00000103846 110 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm22918-201ENSMUST00000103855 110 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Mir6977-201ENSMUST00000184960 64 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.34■□□□□ 0.69
Col11a2Q64739 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm2423-201ENSMUST00000074863 733 ntBASIC19.34■□□□□ 0.69
Col11a2Q64739 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col11a2Q64739 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col11a2Q64739 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col11a2Q64739 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col11a2Q64739 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.33■□□□□ 0.69
Col11a2Q64739 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.69
Col11a2Q64739 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col11a2Q64739 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.33■□□□□ 0.68
Col11a2Q64739 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Gm12151-201ENSMUST00000121374 290 ntBASIC19.33■□□□□ 0.68
Col11a2Q64739 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.33■□□□□ 0.68
Col11a2Q64739 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.33■□□□□ 0.68
Col11a2Q64739 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.33■□□□□ 0.68
Col11a2Q64739 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms