Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vamp1Q62442 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vamp1Q62442 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vamp1Q62442 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vamp1Q62442 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.82□□□□□ -0.2
Vamp1Q62442 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Rab3c-203ENSMUST00000224180 967 ntBASIC13.82□□□□□ -0.2
Vamp1Q62442 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vamp1Q62442 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vamp1Q62442 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.81□□□□□ -0.2
Vamp1Q62442 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vamp1Q62442 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.81□□□□□ -0.2
Vamp1Q62442 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.81□□□□□ -0.2
Vamp1Q62442 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vamp1Q62442 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vamp1Q62442 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Vamp1Q62442 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vamp1Q62442 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.8□□□□□ -0.2
Vamp1Q62442 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.8□□□□□ -0.2
Vamp1Q62442 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Asic1-205ENSMUST00000228185 1818 ntBASIC13.8□□□□□ -0.2
Vamp1Q62442 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vamp1Q62442 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Vamp1Q62442 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms