Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.29□□□□□ -0.12
Traf4Q61382 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Traf4Q61382 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Mir3081-201ENSMUST00000175305 84 ntBASIC14.29□□□□□ -0.12
Traf4Q61382 Gm27357-201ENSMUST00000183754 135 ntBASIC14.29□□□□□ -0.12
Traf4Q61382 Gm45328-201ENSMUST00000210942 917 ntBASIC14.29□□□□□ -0.12
Traf4Q61382 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.29□□□□□ -0.12
Traf4Q61382 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Traf4Q61382 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Traf4Q61382 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Traf4Q61382 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.28□□□□□ -0.12
Traf4Q61382 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Gm27742-201ENSMUST00000184667 60 ntBASIC14.28□□□□□ -0.12
Traf4Q61382 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.28□□□□□ -0.12
Traf4Q61382 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.28□□□□□ -0.12
Traf4Q61382 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Traf4Q61382 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Traf4Q61382 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Traf4Q61382 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.27□□□□□ -0.12
Traf4Q61382 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Traf4Q61382 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Traf4Q61382 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.27□□□□□ -0.12
Traf4Q61382 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Traf4Q61382 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf4Q61382 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf4Q61382 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf4Q61382 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.27□□□□□ -0.13
Traf4Q61382 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf4Q61382 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf4Q61382 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Traf4Q61382 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Traf4Q61382 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf4Q61382 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf4Q61382 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Traf4Q61382 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Traf4Q61382 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Gm27000-201ENSMUST00000182943 842 ntBASIC14.26□□□□□ -0.13
Traf4Q61382 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf4Q61382 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Traf4Q61382 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms