Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.84■□□□□ 0.45
Ift88Q61371 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ift88Q61371 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.84■□□□□ 0.45
Ift88Q61371 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.84■□□□□ 0.45
Ift88Q61371 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.84■□□□□ 0.45
Ift88Q61371 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ift88Q61371 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ift88Q61371 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ift88Q61371 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ift88Q61371 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ift88Q61371 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Ift88Q61371 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ift88Q61371 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ift88Q61371 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ift88Q61371 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ift88Q61371 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ift88Q61371 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ift88Q61371 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ift88Q61371 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ift88Q61371 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Ift88Q61371 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.82■□□□□ 0.44
Ift88Q61371 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ift88Q61371 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ift88Q61371 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ift88Q61371 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.81■□□□□ 0.44
Ift88Q61371 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.81■□□□□ 0.44
Ift88Q61371 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ift88Q61371 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.81■□□□□ 0.44
Ift88Q61371 App-207ENSMUST00000227737 2827 ntBASIC17.8■□□□□ 0.44
Ift88Q61371 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ift88Q61371 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ift88Q61371 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ift88Q61371 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ift88Q61371 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.79■□□□□ 0.44
Ift88Q61371 Gm13436-201ENSMUST00000120418 567 ntBASIC17.79■□□□□ 0.44
Ift88Q61371 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.79■□□□□ 0.44
Ift88Q61371 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ift88Q61371 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms