Protein–RNA interactions for Protein: Q61165

Slc9a1, Sodium/hydrogen exchanger 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a1Q61165 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.17■□□□□ 0.5
Slc9a1Q61165 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a1Q61165 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Gm15372-201ENSMUST00000120729 834 ntBASIC18.16■□□□□ 0.5
Slc9a1Q61165 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slc9a1Q61165 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.16■□□□□ 0.5
Slc9a1Q61165 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a1Q61165 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Gm27867-201ENSMUST00000184778 125 ntBASIC18.15■□□□□ 0.5
Slc9a1Q61165 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a1Q61165 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc9a1Q61165 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.14■□□□□ 0.49
Slc9a1Q61165 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc9a1Q61165 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc9a1Q61165 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.14■□□□□ 0.49
Slc9a1Q61165 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc9a1Q61165 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Gm15165-201ENSMUST00000118140 502 ntBASIC18.13■□□□□ 0.49
Slc9a1Q61165 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.13■□□□□ 0.49
Slc9a1Q61165 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a1Q61165 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a1Q61165 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms