Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1h4Q60641 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Nr1h4Q60641 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1h4Q60641 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1h4Q60641 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Nr1h4Q60641 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.33■□□□□ 0.04
Nr1h4Q60641 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.33■□□□□ 0.04
Nr1h4Q60641 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.33■□□□□ 0.04
Nr1h4Q60641 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1h4Q60641 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.32■□□□□ 0.04
Nr1h4Q60641 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gm11539-201ENSMUST00000119837 557 ntBASIC15.32■□□□□ 0.04
Nr1h4Q60641 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gm44450-201ENSMUST00000199528 114 ntBASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gm21814-202ENSMUST00000203277 873 ntBASIC15.32■□□□□ 0.04
Nr1h4Q60641 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.32■□□□□ 0.04
Nr1h4Q60641 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1h4Q60641 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Gm715-201ENSMUST00000117865 831 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Gm13168-201ENSMUST00000121771 632 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nr1h4Q60641 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1h4Q60641 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.31■□□□□ 0.04
Nr1h4Q60641 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1h4Q60641 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nr1h4Q60641 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms