Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav7d-4Q5R1H9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gm4974-201ENSMUST00000209974 875 ntBASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gm6365-201ENSMUST00000054711 744 ntBASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-4Q5R1H9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gm17661-201ENSMUST00000170317 270 ntBASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.31□□□□□ -0.44
Trav7d-4Q5R1H9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-4Q5R1H9 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms