Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-3Q5R1E6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Gm45058-201ENSMUST00000205810 766 ntBASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-3Q5R1E6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-3Q5R1E6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Gm18959-201ENSMUST00000208954 655 ntBASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms