Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-3Q5R1C3 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-3Q5R1C3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-3Q5R1C3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms