Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps41Q5KU39 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps41Q5KU39 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.81■□□□□ 0.28
Vps41Q5KU39 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Odf3b-204ENSMUST00000227834 930 ntBASIC16.81■□□□□ 0.28
Vps41Q5KU39 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps41Q5KU39 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.8■□□□□ 0.28
Vps41Q5KU39 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.8■□□□□ 0.28
Vps41Q5KU39 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.8■□□□□ 0.28
Vps41Q5KU39 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.8■□□□□ 0.28
Vps41Q5KU39 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps41Q5KU39 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps41Q5KU39 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.79■□□□□ 0.28
Vps41Q5KU39 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps41Q5KU39 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 App-207ENSMUST00000227737 2827 ntBASIC16.78■□□□□ 0.28
Vps41Q5KU39 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps41Q5KU39 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.78■□□□□ 0.28
Vps41Q5KU39 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.78■□□□□ 0.28
Vps41Q5KU39 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms