Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl5Q3UTQ8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl5Q3UTQ8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl5Q3UTQ8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl5Q3UTQ8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl5Q3UTQ8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl5Q3UTQ8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl5Q3UTQ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl5Q3UTQ8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.63■□□□□ 0.57
Cdkl5Q3UTQ8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkl5Q3UTQ8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdkl5Q3UTQ8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkl5Q3UTQ8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdkl5Q3UTQ8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkl5Q3UTQ8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cdkl5Q3UTQ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms