Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1brtQ3UNC9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Mir7075-201ENSMUST00000184187 82 ntBASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1brtQ3UNC9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.65□□□□□ -0.55
Cks1brtQ3UNC9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1brtQ3UNC9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1brtQ3UNC9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.65□□□□□ -0.55
Cks1brtQ3UNC9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1brtQ3UNC9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Gm13534-201ENSMUST00000121169 513 ntBASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1brtQ3UNC9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1brtQ3UNC9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms