Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3aQ3ULJ3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.88■□□□□ 0.29
Upf3aQ3ULJ3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Mir3113-201ENSMUST00000175478 76 ntBASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3aQ3ULJ3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Upf3aQ3ULJ3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf3aQ3ULJ3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms