Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Gm25925-201ENSMUST00000158314 306 ntBASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx27Q3UHD6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gm27525-201ENSMUST00000184465 107 ntBASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 AV026068-213ENSMUST00000223675 1171 ntBASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx27Q3UHD6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx27Q3UHD6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gm27646-201ENSMUST00000183989 110 ntBASIC17.3■□□□□ 0.36
Snx27Q3UHD6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Snx27Q3UHD6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx27Q3UHD6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms