Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm45331-201ENSMUST00000209868 554 ntBASIC18.83■□□□□ 0.6
Rnf180Q3U827 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.83■□□□□ 0.6
Rnf180Q3U827 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.83■□□□□ 0.6
Rnf180Q3U827 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rnf180Q3U827 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.82■□□□□ 0.6
Rnf180Q3U827 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Gm17150-201ENSMUST00000165577 381 ntBASIC18.82■□□□□ 0.6
Rnf180Q3U827 Gm24694-201ENSMUST00000180054 110 ntBASIC18.82■□□□□ 0.6
Rnf180Q3U827 Gm27663-201ENSMUST00000184839 110 ntBASIC18.82■□□□□ 0.6
Rnf180Q3U827 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rnf180Q3U827 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.81■□□□□ 0.6
Rnf180Q3U827 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Gm2272-201ENSMUST00000194903 582 ntBASIC18.81■□□□□ 0.6
Rnf180Q3U827 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf180Q3U827 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Gm6973-201ENSMUST00000117080 721 ntBASIC18.8■□□□□ 0.6
Rnf180Q3U827 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.8■□□□□ 0.6
Rnf180Q3U827 Gm19164-201ENSMUST00000210667 640 ntBASIC18.8■□□□□ 0.6
Rnf180Q3U827 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf180Q3U827 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Gm2810-201ENSMUST00000118681 990 ntBASIC18.79■□□□□ 0.6
Rnf180Q3U827 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Gm45841-201ENSMUST00000207700 164 ntBASIC18.79■□□□□ 0.6
Rnf180Q3U827 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.79■□□□□ 0.6
Rnf180Q3U827 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf180Q3U827 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.78■□□□□ 0.6
Rnf180Q3U827 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Mir3547-201ENSMUST00000175461 88 ntBASIC18.78■□□□□ 0.6
Rnf180Q3U827 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Gm27680-201ENSMUST00000184192 160 ntBASIC18.78■□□□□ 0.6
Rnf180Q3U827 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf180Q3U827 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms