Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Gm44450-201ENSMUST00000199528 114 ntBASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Trim43aQ3TL54 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43aQ3TL54 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Gm15565-201ENSMUST00000118890 427 ntBASIC17.07■□□□□ 0.32
Trim43aQ3TL54 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43aQ3TL54 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43aQ3TL54 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms