Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.84■□□□□ 0.13
Q3KNL4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.84■□□□□ 0.13
Q3KNL4 Gm18421-201ENSMUST00000204122 625 ntBASIC15.84■□□□□ 0.13
Q3KNL4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Q3KNL4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Q3KNL4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Q3KNL4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Q3KNL4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.83■□□□□ 0.13
Q3KNL4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Q3KNL4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Q3KNL4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Q3KNL4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Q3KNL4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.83■□□□□ 0.12
Q3KNL4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.83■□□□□ 0.12
Q3KNL4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.83■□□□□ 0.12
Q3KNL4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.83■□□□□ 0.12
Q3KNL4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.83■□□□□ 0.12
Q3KNL4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Q3KNL4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Q3KNL4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q3KNL4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.83■□□□□ 0.12
Q3KNL4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.82■□□□□ 0.12
Q3KNL4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.82■□□□□ 0.12
Q3KNL4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.82■□□□□ 0.12
Q3KNL4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Q3KNL4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.82■□□□□ 0.12
Q3KNL4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q3KNL4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q3KNL4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Q3KNL4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.81■□□□□ 0.12
Q3KNL4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Q3KNL4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Q3KNL4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.81■□□□□ 0.12
Q3KNL4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.81■□□□□ 0.12
Q3KNL4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.81■□□□□ 0.12
Q3KNL4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.81■□□□□ 0.12
Q3KNL4 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Q3KNL4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q3KNL4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q3KNL4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Q3KNL4 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.8■□□□□ 0.12
Q3KNL4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms