Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm2574-201ENSMUST00000181051 1002 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm3200-201ENSMUST00000181493 1002 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm4518-201ENSMUST00000182638 718 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm8330-201ENSMUST00000182754 1008 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm4575-201ENSMUST00000182991 1002 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm8709-201ENSMUST00000183230 1012 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm10293-201ENSMUST00000076317 1002 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm6316-201ENSMUST00000082064 1020 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm18753-201ENSMUST00000201000 566 ntBASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ush2AQ2QI47 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Ush2AQ2QI47 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gm9824-201ENSMUST00000178707 561 ntBASIC8.52□□□□□ -1.05
Ush2AQ2QI47 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Ush2AQ2QI47 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm7787-201ENSMUST00000216858 688 ntBASIC8.51□□□□□ -1.05
Ush2AQ2QI47 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ush2AQ2QI47 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms