Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Gm11950-201ENSMUST00000121615 838 ntBASIC12.44□□□□□ -0.42
Cdx4Q07424 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Gm6623-201ENSMUST00000173570 544 ntBASIC12.44□□□□□ -0.42
Cdx4Q07424 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Gm18115-201ENSMUST00000221209 621 ntBASIC12.44□□□□□ -0.42
Cdx4Q07424 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdx4Q07424 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cdx4Q07424 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.43□□□□□ -0.42
Cdx4Q07424 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdx4Q07424 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdx4Q07424 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdx4Q07424 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Actl10-202ENSMUST00000226583 1501 ntBASIC12.42□□□□□ -0.42
Cdx4Q07424 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Gm13186-201ENSMUST00000118031 316 ntBASIC12.42□□□□□ -0.42
Cdx4Q07424 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.42□□□□□ -0.42
Cdx4Q07424 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdx4Q07424 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cdx4Q07424 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx4Q07424 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms