Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.19■□□□□ 0.82
Nkx2-3P97334 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx2-3P97334 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.18■□□□□ 0.82
Nkx2-3P97334 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx2-3P97334 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Mir8117-201ENSMUST00000184773 107 ntBASIC20.17■□□□□ 0.82
Nkx2-3P97334 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.17■□□□□ 0.82
Nkx2-3P97334 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx2-3P97334 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.16■□□□□ 0.82
Nkx2-3P97334 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx2-3P97334 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.15■□□□□ 0.82
Nkx2-3P97334 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.15■□□□□ 0.82
Nkx2-3P97334 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Nkx2-3P97334 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Nkx2-3P97334 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx2-3P97334 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Gm8344-201ENSMUST00000119813 856 ntBASIC20.14■□□□□ 0.81
Nkx2-3P97334 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx2-3P97334 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms