Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.39□□□□□ -0.27
Pdlim4P70271 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.39□□□□□ -0.27
Pdlim4P70271 Gm13216-201ENSMUST00000117145 591 ntBASIC13.39□□□□□ -0.27
Pdlim4P70271 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pdlim4P70271 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdlim4P70271 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdlim4P70271 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim4P70271 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim4P70271 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim4P70271 Gm7284-201ENSMUST00000131667 944 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pdlim4P70271 Gm10052-201ENSMUST00000168019 960 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Gm7729-201ENSMUST00000050143 801 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim4P70271 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.38□□□□□ -0.27
Pdlim4P70271 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim4P70271 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Gm27704-201ENSMUST00000185094 107 ntBASIC13.37□□□□□ -0.27
Pdlim4P70271 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.37□□□□□ -0.27
Pdlim4P70271 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.37□□□□□ -0.27
Pdlim4P70271 Gm7367-201ENSMUST00000057611 492 ntBASIC13.37□□□□□ -0.27
Pdlim4P70271 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.37□□□□□ -0.27
Pdlim4P70271 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pdlim4P70271 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim4P70271 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim4P70271 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms