Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.29■□□□□ 0.2
ThraP63058 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ThraP63058 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ThraP63058 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ThraP63058 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.28■□□□□ 0.2
ThraP63058 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.28■□□□□ 0.2
ThraP63058 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
ThraP63058 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.28■□□□□ 0.2
ThraP63058 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.28■□□□□ 0.2
ThraP63058 Gm27000-201ENSMUST00000182943 842 ntBASIC16.28■□□□□ 0.2
ThraP63058 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Gm7461-201ENSMUST00000058918 827 ntBASIC16.28■□□□□ 0.2
ThraP63058 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ThraP63058 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.27■□□□□ 0.2
ThraP63058 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.27■□□□□ 0.2
ThraP63058 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ThraP63058 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ThraP63058 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ThraP63058 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ThraP63058 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ThraP63058 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ThraP63058 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ThraP63058 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ThraP63058 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
ThraP63058 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ThraP63058 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Olfr129-201ENSMUST00000122318 993 ntBASIC16.26■□□□□ 0.19
ThraP63058 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ThraP63058 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ThraP63058 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.26■□□□□ 0.19
ThraP63058 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ThraP63058 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.25■□□□□ 0.19
ThraP63058 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ThraP63058 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ThraP63058 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ThraP63058 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
ThraP63058 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
ThraP63058 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ThraP63058 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms