Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.45■□□□□ 0.22
Ybx1P62960 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.45■□□□□ 0.22
Ybx1P62960 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.45■□□□□ 0.22
Ybx1P62960 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.45■□□□□ 0.22
Ybx1P62960 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ybx1P62960 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ybx1P62960 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
Ybx1P62960 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ybx1P62960 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ybx1P62960 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.44■□□□□ 0.22
Ybx1P62960 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ybx1P62960 Gm6736-201ENSMUST00000166583 948 ntBASIC16.44■□□□□ 0.22
Ybx1P62960 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.44■□□□□ 0.22
Ybx1P62960 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.44■□□□□ 0.22
Ybx1P62960 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.44■□□□□ 0.22
Ybx1P62960 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.44■□□□□ 0.22
Ybx1P62960 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ybx1P62960 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ybx1P62960 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.43■□□□□ 0.22
Ybx1P62960 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
Ybx1P62960 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.43■□□□□ 0.22
Ybx1P62960 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Ybx1P62960 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ybx1P62960 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ybx1P62960 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ybx1P62960 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Gm7222-201ENSMUST00000117512 906 ntBASIC16.42■□□□□ 0.22
Ybx1P62960 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.42■□□□□ 0.22
Ybx1P62960 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.42■□□□□ 0.22
Ybx1P62960 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ybx1P62960 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.41■□□□□ 0.22
Ybx1P62960 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ybx1P62960 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ybx1P62960 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Gm14822-201ENSMUST00000122247 291 ntBASIC16.41■□□□□ 0.22
Ybx1P62960 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.41■□□□□ 0.22
Ybx1P62960 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.41■□□□□ 0.22
Ybx1P62960 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.41■□□□□ 0.22
Ybx1P62960 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.41■□□□□ 0.22
Ybx1P62960 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ybx1P62960 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ybx1P62960 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms