Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm24841-201ENSMUST00000158676 357 ntBASIC13.59□□□□□ -0.23
Gabra1P62812 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.59□□□□□ -0.23
Gabra1P62812 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Gm17661-201ENSMUST00000170317 270 ntBASIC13.59□□□□□ -0.23
Gabra1P62812 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Gabra1P62812 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabra1P62812 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gabra1P62812 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gabra1P62812 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gabra1P62812 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Gabra1P62812 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Gabra1P62812 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Gabra1P62812 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gabra1P62812 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.58□□□□□ -0.24
Gabra1P62812 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Gabra1P62812 Sybu-209ENSMUST00000228639 4113 ntBASIC13.58□□□□□ -0.24
Gabra1P62812 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.58□□□□□ -0.24
Gabra1P62812 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.58□□□□□ -0.24
Gabra1P62812 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
Gabra1P62812 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gabra1P62812 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.57□□□□□ -0.24
Gabra1P62812 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Gabra1P62812 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Dio3-201ENSMUST00000097228 1449 ntBASIC13.57□□□□□ -0.24
Gabra1P62812 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Gabra1P62812 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Gm10849-201ENSMUST00000100397 618 ntBASIC13.57□□□□□ -0.24
Gabra1P62812 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.57□□□□□ -0.24
Gabra1P62812 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Mir5133-201ENSMUST00000174955 77 ntBASIC13.57□□□□□ -0.24
Gabra1P62812 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.57□□□□□ -0.24
Gabra1P62812 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gabra1P62812 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.57□□□□□ -0.24
Gabra1P62812 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gabra1P62812 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.56□□□□□ -0.24
Gabra1P62812 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Gabra1P62812 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gabra1P62812 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.56□□□□□ -0.24
Gabra1P62812 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Gabra1P62812 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.56□□□□□ -0.24
Gabra1P62812 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.56□□□□□ -0.24
Gabra1P62812 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gabra1P62812 Gm18025-201ENSMUST00000221733 862 ntBASIC13.56□□□□□ -0.24
Gabra1P62812 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms