Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lsm3P62311 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Gm44549-201ENSMUST00000208351 577 ntBASIC14.76□□□□□ -0.05
Lsm3P62311 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.76□□□□□ -0.05
Lsm3P62311 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lsm3P62311 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Lsm3P62311 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Lsm3P62311 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Lsm3P62311 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.75□□□□□ -0.05
Lsm3P62311 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Lsm3P62311 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Lsm3P62311 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Lsm3P62311 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Lsm3P62311 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Lsm3P62311 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.74□□□□□ -0.05
Lsm3P62311 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Lsm3P62311 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm3P62311 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.73□□□□□ -0.05
Lsm3P62311 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.73□□□□□ -0.05
Lsm3P62311 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.73□□□□□ -0.05
Lsm3P62311 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Mir6349-201ENSMUST00000184059 97 ntBASIC14.73□□□□□ -0.05
Lsm3P62311 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm3P62311 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Gm6365-201ENSMUST00000054711 744 ntBASIC14.73□□□□□ -0.05
Lsm3P62311 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm3P62311 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm3P62311 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Lsm3P62311 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.72□□□□□ -0.05
Lsm3P62311 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.72□□□□□ -0.05
Lsm3P62311 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.72□□□□□ -0.05
Lsm3P62311 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lsm3P62311 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lsm3P62311 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Lsm3P62311 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms