Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.3□□□□□ -0.12
Sf3b6P59708 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sf3b6P59708 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b6P59708 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.29□□□□□ -0.12
Sf3b6P59708 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sf3b6P59708 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Phf7-203ENSMUST00000226565 1971 ntBASIC14.29□□□□□ -0.12
Sf3b6P59708 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sf3b6P59708 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.28□□□□□ -0.12
Sf3b6P59708 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sf3b6P59708 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sf3b6P59708 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b6P59708 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sf3b6P59708 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sf3b6P59708 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.27□□□□□ -0.12
Sf3b6P59708 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sf3b6P59708 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.27□□□□□ -0.12
Sf3b6P59708 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.27□□□□□ -0.13
Sf3b6P59708 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.27□□□□□ -0.13
Sf3b6P59708 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms