Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.25■□□□□ 0.83
Vps33bP59016 Mir6977-201ENSMUST00000184960 64 ntBASIC20.25■□□□□ 0.83
Vps33bP59016 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.25■□□□□ 0.83
Vps33bP59016 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33bP59016 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33bP59016 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.25■□□□□ 0.83
Vps33bP59016 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33bP59016 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33bP59016 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33bP59016 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Gm25287-201ENSMUST00000103846 110 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Gm22918-201ENSMUST00000103855 110 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Gm7774-201ENSMUST00000200064 533 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.24■□□□□ 0.83
Vps33bP59016 Gm18057-201ENSMUST00000208220 503 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Gm18246-201ENSMUST00000221023 728 ntBASIC20.24■□□□□ 0.83
Vps33bP59016 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.24■□□□□ 0.83
Vps33bP59016 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33bP59016 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.23■□□□□ 0.83
Vps33bP59016 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vps33bP59016 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Vps33bP59016 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.23■□□□□ 0.83
Vps33bP59016 Gm12428-201ENSMUST00000119844 727 ntBASIC20.23■□□□□ 0.83
Vps33bP59016 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.23■□□□□ 0.83
Vps33bP59016 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.23■□□□□ 0.83
Vps33bP59016 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vps33bP59016 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.23■□□□□ 0.83
Vps33bP59016 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vps33bP59016 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vps33bP59016 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33bP59016 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vps33bP59016 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vps33bP59016 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Gm27437-201ENSMUST00000183429 107 ntBASIC20.22■□□□□ 0.83
Vps33bP59016 Gm2272-201ENSMUST00000194903 582 ntBASIC20.22■□□□□ 0.83
Vps33bP59016 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vps33bP59016 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vps33bP59016 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.22■□□□□ 0.83
Vps33bP59016 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.22■□□□□ 0.83
Vps33bP59016 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vps33bP59016 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33bP59016 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Gm12008-201ENSMUST00000117791 755 ntBASIC20.21■□□□□ 0.83
Vps33bP59016 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC20.21■□□□□ 0.83
Vps33bP59016 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.21■□□□□ 0.83
Vps33bP59016 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.21■□□□□ 0.83
Vps33bP59016 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vps33bP59016 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.21■□□□□ 0.83
Vps33bP59016 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Vps33bP59016 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33bP59016 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.2■□□□□ 0.82
Vps33bP59016 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps33bP59016 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vps33bP59016 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps33bP59016 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.2■□□□□ 0.82
Vps33bP59016 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vps33bP59016 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Vps33bP59016 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms