Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.01■□□□□ 0.63
Rhbdl3P58873 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Rhbdl3P58873 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.01■□□□□ 0.63
Rhbdl3P58873 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rhbdl3P58873 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rhbdl3P58873 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Rhbdl3P58873 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19■□□□□ 0.63
Rhbdl3P58873 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19■□□□□ 0.63
Rhbdl3P58873 Gm37153-201ENSMUST00000193637 231 ntBASIC19■□□□□ 0.63
Rhbdl3P58873 Gm45167-201ENSMUST00000208007 322 ntBASIC19■□□□□ 0.63
Rhbdl3P58873 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19■□□□□ 0.63
Rhbdl3P58873 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19■□□□□ 0.63
Rhbdl3P58873 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19■□□□□ 0.63
Rhbdl3P58873 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rhbdl3P58873 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rhbdl3P58873 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rhbdl3P58873 Gm11873-201ENSMUST00000117877 1304 ntBASIC19■□□□□ 0.63
Rhbdl3P58873 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Gm25911-201ENSMUST00000157621 56 ntBASIC18.99■□□□□ 0.63
Rhbdl3P58873 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Gm4899-201ENSMUST00000178708 719 ntBASIC18.99■□□□□ 0.63
Rhbdl3P58873 Gm27702-201ENSMUST00000184512 56 ntBASIC18.99■□□□□ 0.63
Rhbdl3P58873 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhbdl3P58873 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Gm2213-201ENSMUST00000197485 688 ntBASIC18.98■□□□□ 0.63
Rhbdl3P58873 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.98■□□□□ 0.63
Rhbdl3P58873 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.98■□□□□ 0.63
Rhbdl3P58873 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
Rhbdl3P58873 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rhbdl3P58873 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.97■□□□□ 0.63
Rhbdl3P58873 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhbdl3P58873 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rhbdl3P58873 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Rhbdl3P58873 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms