Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Tpm1P58771 Gm37856-201ENSMUST00000191634 999 ntBASIC17.99■□□□□ 0.47
Tpm1P58771 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tpm1P58771 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.99■□□□□ 0.47
Tpm1P58771 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Tpm1P58771 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tpm1P58771 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.98■□□□□ 0.47
Tpm1P58771 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.98■□□□□ 0.47
Tpm1P58771 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tpm1P58771 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.98■□□□□ 0.47
Tpm1P58771 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.98■□□□□ 0.47
Tpm1P58771 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tpm1P58771 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.98■□□□□ 0.47
Tpm1P58771 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tpm1P58771 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.97■□□□□ 0.47
Tpm1P58771 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.97■□□□□ 0.47
Tpm1P58771 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tpm1P58771 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tpm1P58771 Gm5643-201ENSMUST00000117081 966 ntBASIC17.97■□□□□ 0.47
Tpm1P58771 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.97■□□□□ 0.47
Tpm1P58771 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Tpm1P58771 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tpm1P58771 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpm1P58771 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.96■□□□□ 0.47
Tpm1P58771 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tpm1P58771 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.96■□□□□ 0.47
Tpm1P58771 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.96■□□□□ 0.47
Tpm1P58771 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tpm1P58771 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpm1P58771 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tpm1P58771 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tpm1P58771 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Tpm1P58771 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.95■□□□□ 0.46
Tpm1P58771 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.95■□□□□ 0.46
Tpm1P58771 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tpm1P58771 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.95■□□□□ 0.46
Tpm1P58771 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.95■□□□□ 0.46
Tpm1P58771 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpm1P58771 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms