Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nub1P54729 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nub1P54729 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.31■□□□□ 0.36
Nub1P54729 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Nub1P54729 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Nub1P54729 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.31■□□□□ 0.36
Nub1P54729 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.31■□□□□ 0.36
Nub1P54729 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Nub1P54729 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nub1P54729 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.3■□□□□ 0.36
Nub1P54729 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nub1P54729 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nub1P54729 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.3■□□□□ 0.36
Nub1P54729 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.3■□□□□ 0.36
Nub1P54729 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nub1P54729 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nub1P54729 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nub1P54729 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.29■□□□□ 0.36
Nub1P54729 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.29■□□□□ 0.36
Nub1P54729 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Gm14859-201ENSMUST00000117752 357 ntBASIC17.29■□□□□ 0.36
Nub1P54729 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.29■□□□□ 0.36
Nub1P54729 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nub1P54729 Gm7367-201ENSMUST00000057611 492 ntBASIC17.29■□□□□ 0.36
Nub1P54729 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Nub1P54729 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Nub1P54729 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nub1P54729 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nub1P54729 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Gm21362-201ENSMUST00000194272 928 ntBASIC17.28■□□□□ 0.36
Nub1P54729 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nub1P54729 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nub1P54729 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms