Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm44466-201ENSMUST00000200264 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm44359-201ENSMUST00000200671 138 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm18195-201ENSMUST00000207604 706 ntBASIC15.18■□□□□ 0.02
RoraP51448 Gm6296-201ENSMUST00000222599 943 ntBASIC15.18■□□□□ 0.02
RoraP51448 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.18■□□□□ 0.02
RoraP51448 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RoraP51448 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.18■□□□□ 0.02
RoraP51448 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.18■□□□□ 0.02
RoraP51448 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.18■□□□□ 0.02
RoraP51448 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
RoraP51448 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RoraP51448 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.17■□□□□ 0.02
RoraP51448 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.17■□□□□ 0.02
RoraP51448 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.17■□□□□ 0.02
RoraP51448 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RoraP51448 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RoraP51448 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RoraP51448 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RoraP51448 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RoraP51448 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.16■□□□□ 0.02
RoraP51448 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RoraP51448 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RoraP51448 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.15■□□□□ 0.02
RoraP51448 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RoraP51448 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Gm25745-201ENSMUST00000174945 133 ntBASIC15.15■□□□□ 0.02
RoraP51448 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RoraP51448 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.15■□□□□ 0.02
RoraP51448 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RoraP51448 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.15■□□□□ 0.02
RoraP51448 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.15■□□□□ 0.02
RoraP51448 Gm6376-201ENSMUST00000209407 580 ntBASIC15.15■□□□□ 0.02
RoraP51448 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RoraP51448 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
RoraP51448 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.15■□□□□ 0.02
RoraP51448 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RoraP51448 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RoraP51448 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RoraP51448 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RoraP51448 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.14■□□□□ 0.01
RoraP51448 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RoraP51448 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RoraP51448 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RoraP51448 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.14■□□□□ 0.01
RoraP51448 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RoraP51448 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms