Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44357-201ENSMUST00000195897 142 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm19658-201ENSMUST00000196231 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44367-201ENSMUST00000196836 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44350-201ENSMUST00000197197 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44390-201ENSMUST00000197533 144 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44313-201ENSMUST00000198018 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44486-201ENSMUST00000198508 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44314-201ENSMUST00000199263 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44394-201ENSMUST00000199558 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44484-201ENSMUST00000199873 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44466-201ENSMUST00000200264 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Gm44359-201ENSMUST00000200671 138 ntBASIC16.29■□□□□ 0.2
Lhx3P50481 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Lhx3P50481 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Lhx3P50481 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx3P50481 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Lhx3P50481 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lhx3P50481 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.28■□□□□ 0.2
Lhx3P50481 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lhx3P50481 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Lhx3P50481 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx3P50481 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.27■□□□□ 0.2
Lhx3P50481 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx3P50481 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Lhx3P50481 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Lhx3P50481 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.27■□□□□ 0.2
Lhx3P50481 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Lhx3P50481 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Lhx3P50481 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx3P50481 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.27■□□□□ 0.2
Lhx3P50481 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx3P50481 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx3P50481 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx3P50481 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lhx3P50481 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.26■□□□□ 0.19
Lhx3P50481 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Lhx3P50481 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Lhx3P50481 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.26■□□□□ 0.19
Lhx3P50481 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Lhx3P50481 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.26■□□□□ 0.19
Lhx3P50481 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.26■□□□□ 0.19
Lhx3P50481 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Lhx3P50481 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.26■□□□□ 0.19
Lhx3P50481 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx3P50481 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.26■□□□□ 0.19
Lhx3P50481 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms