Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.5■□□□□ 0.23
SftpbP50405 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.5■□□□□ 0.23
SftpbP50405 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SftpbP50405 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.5■□□□□ 0.23
SftpbP50405 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SftpbP50405 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SftpbP50405 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Gm13436-201ENSMUST00000120418 567 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.49■□□□□ 0.23
SftpbP50405 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.49■□□□□ 0.23
SftpbP50405 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.49■□□□□ 0.23
SftpbP50405 Gm37055-201ENSMUST00000191866 133 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.49■□□□□ 0.23
SftpbP50405 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SftpbP50405 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SftpbP50405 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SftpbP50405 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.48■□□□□ 0.23
SftpbP50405 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.48■□□□□ 0.23
SftpbP50405 Gm11336-201ENSMUST00000118168 334 ntBASIC16.48■□□□□ 0.23
SftpbP50405 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Gm13474-201ENSMUST00000122466 815 ntBASIC16.48■□□□□ 0.23
SftpbP50405 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.48■□□□□ 0.23
SftpbP50405 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.48■□□□□ 0.23
SftpbP50405 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SftpbP50405 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.48■□□□□ 0.23
SftpbP50405 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SftpbP50405 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.47■□□□□ 0.23
SftpbP50405 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SftpbP50405 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SftpbP50405 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms