Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx2-1P50220 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Gm15378-201ENSMUST00000121894 207 ntBASIC13.37□□□□□ -0.27
Nkx2-1P50220 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Gm9731-201ENSMUST00000209480 747 ntBASIC13.37□□□□□ -0.27
Nkx2-1P50220 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.37□□□□□ -0.27
Nkx2-1P50220 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx2-1P50220 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.36□□□□□ -0.27
Nkx2-1P50220 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx2-1P50220 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.35□□□□□ -0.27
Nkx2-1P50220 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gm18958-201ENSMUST00000174258 762 ntBASIC13.35□□□□□ -0.27
Nkx2-1P50220 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms