Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.84■□□□□ 0.29
Rfx2P48379 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Rfx2P48379 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx2P48379 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.84■□□□□ 0.29
Rfx2P48379 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx2P48379 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx2P48379 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx2P48379 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rfx2P48379 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx2P48379 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Gm12644-201ENSMUST00000119935 606 ntBASIC16.83■□□□□ 0.28
Rfx2P48379 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfx2P48379 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx2P48379 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx2P48379 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.83■□□□□ 0.28
Rfx2P48379 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.83■□□□□ 0.28
Rfx2P48379 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rfx2P48379 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx2P48379 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfx2P48379 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfx2P48379 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfx2P48379 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfx2P48379 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.82■□□□□ 0.28
Rfx2P48379 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.82■□□□□ 0.28
Rfx2P48379 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfx2P48379 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
Rfx2P48379 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Rfx2P48379 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfx2P48379 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx2P48379 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx2P48379 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx2P48379 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfx2P48379 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfx2P48379 Gm44454-201ENSMUST00000198541 138 ntBASIC16.81■□□□□ 0.28
Rfx2P48379 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.81■□□□□ 0.28
Rfx2P48379 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.81■□□□□ 0.28
Rfx2P48379 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx2P48379 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx2P48379 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx2P48379 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx2P48379 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx2P48379 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms