Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps4bP46467 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps4bP46467 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Vps4bP46467 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Gm6659-201ENSMUST00000174752 547 ntBASIC16.34■□□□□ 0.21
Vps4bP46467 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.34■□□□□ 0.21
Vps4bP46467 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps4bP46467 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps4bP46467 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps4bP46467 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Vps4bP46467 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps4bP46467 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.33■□□□□ 0.2
Vps4bP46467 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.33■□□□□ 0.2
Vps4bP46467 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4bP46467 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps4bP46467 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.32■□□□□ 0.2
Vps4bP46467 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps4bP46467 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Vps4bP46467 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps4bP46467 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps4bP46467 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vps4bP46467 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps4bP46467 Gm27389-201ENSMUST00000183622 195 ntBASIC16.32■□□□□ 0.2
Vps4bP46467 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps4bP46467 Gm7889-201ENSMUST00000185591 958 ntBASIC16.32■□□□□ 0.2
Vps4bP46467 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps4bP46467 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps4bP46467 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4bP46467 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps4bP46467 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps4bP46467 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Vps4bP46467 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps4bP46467 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps4bP46467 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms