Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.18■□□□□ 0.02
Nkx2-6P43688 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.18■□□□□ 0.02
Nkx2-6P43688 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-6P43688 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-6P43688 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.16■□□□□ 0.02
Nkx2-6P43688 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gm25406-201ENSMUST00000157599 105 ntBASIC15.16■□□□□ 0.02
Nkx2-6P43688 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx2-6P43688 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.16■□□□□ 0.02
Nkx2-6P43688 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-6P43688 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.15■□□□□ 0.02
Nkx2-6P43688 Gm7506-201ENSMUST00000207758 815 ntBASIC15.15■□□□□ 0.02
Nkx2-6P43688 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-6P43688 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms