Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sdc2P43407 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sdc2P43407 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sdc2P43407 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.07■□□□□ 0.48
Sdc2P43407 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.07■□□□□ 0.48
Sdc2P43407 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Sdc2P43407 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sdc2P43407 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sdc2P43407 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sdc2P43407 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.06■□□□□ 0.48
Sdc2P43407 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.06■□□□□ 0.48
Sdc2P43407 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.06■□□□□ 0.48
Sdc2P43407 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sdc2P43407 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sdc2P43407 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sdc2P43407 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.06■□□□□ 0.48
Sdc2P43407 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sdc2P43407 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.06■□□□□ 0.48
Sdc2P43407 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sdc2P43407 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.06■□□□□ 0.48
Sdc2P43407 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sdc2P43407 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdc2P43407 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sdc2P43407 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sdc2P43407 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.05■□□□□ 0.48
Sdc2P43407 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.05■□□□□ 0.48
Sdc2P43407 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sdc2P43407 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdc2P43407 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.05■□□□□ 0.48
Sdc2P43407 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Sdc2P43407 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sdc2P43407 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Sdc2P43407 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.04■□□□□ 0.48
Sdc2P43407 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.04■□□□□ 0.48
Sdc2P43407 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Sdc2P43407 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sdc2P43407 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.04■□□□□ 0.48
Sdc2P43407 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdc2P43407 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.03■□□□□ 0.48
Sdc2P43407 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sdc2P43407 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sdc2P43407 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sdc2P43407 Gm15565-201ENSMUST00000118890 427 ntBASIC18.03■□□□□ 0.48
Sdc2P43407 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sdc2P43407 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sdc2P43407 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.03■□□□□ 0.48
Sdc2P43407 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdc2P43407 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms