Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Gm715-201ENSMUST00000117865 831 ntBASIC13.31□□□□□ -0.28
Hist1h1aP43275 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.31□□□□□ -0.28
Hist1h1aP43275 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.31□□□□□ -0.28
Hist1h1aP43275 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.31□□□□□ -0.28
Hist1h1aP43275 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist1h1aP43275 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.3□□□□□ -0.28
Hist1h1aP43275 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist1h1aP43275 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gm27463-201ENSMUST00000183569 57 ntBASIC13.29□□□□□ -0.28
Hist1h1aP43275 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gm3375-201ENSMUST00000203929 796 ntBASIC13.29□□□□□ -0.28
Hist1h1aP43275 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.29□□□□□ -0.28
Hist1h1aP43275 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.29□□□□□ -0.28
Hist1h1aP43275 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist1h1aP43275 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hist1h1aP43275 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms