Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Gm7284-201ENSMUST00000131667 944 ntBASIC14.76□□□□□ -0.05
Nkx2-2P42586 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.76□□□□□ -0.05
Nkx2-2P42586 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-2P42586 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Mir3081-201ENSMUST00000175305 84 ntBASIC14.75□□□□□ -0.05
Nkx2-2P42586 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.75□□□□□ -0.05
Nkx2-2P42586 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.75□□□□□ -0.05
Nkx2-2P42586 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.75□□□□□ -0.05
Nkx2-2P42586 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-2P42586 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx2-2P42586 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Rprl3-201ENSMUST00000157400 290 ntBASIC14.73□□□□□ -0.05
Nkx2-2P42586 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.73□□□□□ -0.05
Nkx2-2P42586 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx2-2P42586 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms