Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.36□□□□□ -0.27
Abca1P41233 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.36□□□□□ -0.27
Abca1P41233 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.36□□□□□ -0.27
Abca1P41233 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Abca1P41233 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.36□□□□□ -0.27
Abca1P41233 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.36□□□□□ -0.27
Abca1P41233 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Abca1P41233 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Abca1P41233 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Abca1P41233 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.35□□□□□ -0.27
Abca1P41233 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.35□□□□□ -0.27
Abca1P41233 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.35□□□□□ -0.27
Abca1P41233 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Abca1P41233 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Abca1P41233 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.35□□□□□ -0.27
Abca1P41233 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Abca1P41233 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Abca1P41233 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Abca1P41233 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abca1P41233 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abca1P41233 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.34□□□□□ -0.27
Abca1P41233 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abca1P41233 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abca1P41233 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Abca1P41233 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Abca1P41233 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Abca1P41233 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Abca1P41233 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Abca1P41233 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gm2213-201ENSMUST00000197485 688 ntBASIC13.33□□□□□ -0.28
Abca1P41233 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Abca1P41233 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.33□□□□□ -0.28
Abca1P41233 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.33□□□□□ -0.28
Abca1P41233 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gm23935-201ENSMUST00000102303 57 ntBASIC13.33□□□□□ -0.28
Abca1P41233 Gm24270-201ENSMUST00000102326 57 ntBASIC13.33□□□□□ -0.28
Abca1P41233 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.33□□□□□ -0.28
Abca1P41233 Gm24245-201ENSMUST00000157318 57 ntBASIC13.33□□□□□ -0.28
Abca1P41233 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.33□□□□□ -0.28
Abca1P41233 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.33□□□□□ -0.28
Abca1P41233 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Abca1P41233 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms