Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm24589-201ENSMUST00000116692 94 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Gm15372-201ENSMUST00000120729 834 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.18□□□□□ -0.3
Timp3P39876 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Timp3P39876 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Timp3P39876 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Timp3P39876 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Birc2-201ENSMUST00000054878 378 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Timp3P39876 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Timp3P39876 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.18□□□□□ -0.3
Timp3P39876 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Timp3P39876 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Timp3P39876 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Timp3P39876 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.17□□□□□ -0.3
Timp3P39876 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.17□□□□□ -0.3
Timp3P39876 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Timp3P39876 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Timp3P39876 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Gm12895-201ENSMUST00000122214 226 ntBASIC13.16□□□□□ -0.3
Timp3P39876 Rprl3-201ENSMUST00000157400 290 ntBASIC13.16□□□□□ -0.3
Timp3P39876 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Timp3P39876 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.16□□□□□ -0.3
Timp3P39876 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Timp3P39876 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Timp3P39876 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.15□□□□□ -0.3
Timp3P39876 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.15□□□□□ -0.3
Timp3P39876 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.15□□□□□ -0.3
Timp3P39876 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Timp3P39876 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms