Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp13P33435 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp13P33435 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Mmp13P33435 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
Mmp13P33435 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.49■□□□□ 0.23
Mmp13P33435 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.49■□□□□ 0.23
Mmp13P33435 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.49■□□□□ 0.23
Mmp13P33435 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.49■□□□□ 0.23
Mmp13P33435 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp13P33435 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Mmp13P33435 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Mmp13P33435 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.48■□□□□ 0.23
Mmp13P33435 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Mmp13P33435 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Mmp13P33435 AA414768-201ENSMUST00000121924 1257 ntBASIC16.48■□□□□ 0.23
Mmp13P33435 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.48■□□□□ 0.23
Mmp13P33435 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.48■□□□□ 0.23
Mmp13P33435 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Mmp13P33435 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.48■□□□□ 0.23
Mmp13P33435 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Mmp13P33435 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp13P33435 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Mmp13P33435 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.47■□□□□ 0.23
Mmp13P33435 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.47■□□□□ 0.23
Mmp13P33435 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Mmp13P33435 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Mmp13P33435 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp13P33435 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.46■□□□□ 0.23
Mmp13P33435 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.46■□□□□ 0.23
Mmp13P33435 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Mmp13P33435 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Mmp13P33435 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.46■□□□□ 0.23
Mmp13P33435 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.46■□□□□ 0.23
Mmp13P33435 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp13P33435 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.46■□□□□ 0.23
Mmp13P33435 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms